Available Libraries
GenSAS provides the following datasets as globally available libraries for use with alignment tools or RepeatMasker. Click here for a file with GenSAS tool and database references.
GenSAS provided library | RNA number | Protein number | Release date |
---|---|---|---|
refseq_archaea | 1,205 | 2,105,145 (nr) | 9/16/2020 |
refseq_bacteria | 23,260 | 154,106,184 (nr) | 9/16/2020 |
refseq_fungi | 3,294,947 | 3,298,550 | 9/17/2020 |
refseq_invertebrate | 5,551,405 | 5,114,272 | 9/16/2020 |
refseq_mitochondrion | NA | 160,879 | 9/16/2020 |
refseq_plant | 6,345,653 | 5,795,592 | 9/16/2020 |
refseq_plasmid | 7 | 1,288,743 (nr) | 9/21/2020 |
refseq_plastid | 44 | 486,771 | 9/17/2020 |
refseq_protozoa | 1,039,327 | 1,091,632 | 9/16/2020 |
refseq_vertebrate_mammalian | 7,806,463 | 6,577,182 | 9/16/2020 |
refseq_vertebrate_other | 9,014,808 | 8,112,356 | 9/16/2020 |
refseq_viral | NA | 477,258 | 9/16/2020 |
sprot | NA | 563,082 | 8/12/2020 |
trembl | NA | 188,961,949 | 8/12/2020 |
RepBase library | NA | NA | 12/24/2018 |